PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN38013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 275aa    MW: 31086.8 Da    PI: 8.1947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN38013.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.35.6e-13110155555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h + Er+RR++i ++f  L   +P +     kKl+Ka++L++A +Y+++Lq
  KHN38013.1 110 HVMSERKRRQDIAEKFLALSATIPGL-----KKLDKATVLREALNYMQQLQ 155
                 8899**********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.091105154IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.8E-16108166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.98E-11110159No hitNo description
Gene3DG3DSA:4.10.280.103.0E-15110172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-10110155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-13111160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS516718.849209275IPR002912ACT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MLSLLPDMME DSWENWLSHL EMNDDFGCTN AVSFDEMVRF NNDSSNVVAA IGPKVEYTDS  60
YLKSSEEEFG TSCYWPKRGV ENNHELEAKT IRDNDRGTKR ARTSTETQYH VMSERKRRQD  120
IAEKFLALSA TIPGLKKLDK ATVLREALNY MQQLQQRIAV LEKAGGNKNK SIKSLIITKS  180
RLCSASCETN SISEVLPEVE ARGLGKEVLI RIYCEKRKGI ILKLLALLKD LHLSIASSSV  240
LPFGNSILNI IIIAQMSEKY NMTVNDLAKS LKQIF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113118ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014634637.10.0PREDICTED: transcription factor bHLH25-like
TrEMBLA0A0B2S0220.0A0A0B2S022_GLYSO; Transcription factor bHLH25
TrEMBLA0A0R0IQG80.0A0A0R0IQG8_SOYBN; Uncharacterized protein
STRINGGLYMA08G23035.11e-175(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14964813
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-35bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]